PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe5G421800.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 235aa    MW: 26599.2 Da    PI: 8.479
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe5G421800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.87.2e-124897455
                       HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                HLH  4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                        h e+Er+RR+++ + +++Lr+l+P+      ++K s ++   +A +Y+k+ q
  Aqcoe5G421800.1.p 48 VHREVERQRRQEMATLYSTLRSLVPHeY---LKGKRSISDHMNEAANYVKHQQ 97
                       69************************77...9*******************88 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.88E-1341112IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.2584496IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-946115IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.0E-94897IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.27E-949101No hitNo description
SMARTSM003533.3E-450102IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    Send to blast
MLLVDPSSEC SNPVKVDKLH HRHKRSGYLN CNGEGDKNND NNKKTKIVHR EVERQRRQEM  60
ATLYSTLRSL VPHEYLKGKR SISDHMNEAA NYVKHQQTKI KELVEERDKL QKMSNSTSDT  120
KKECSSFPNF VNVQASFAGV EIIISSGSRD RGLALSWLLV VLVEEGLSVA SCISTKANEI  180
TFHTIQAEVI NPDDFDLCGL QHKLINLSHS PVPKYLMNHR DYIDLSLAYS RSHP*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012090357.11e-53PREDICTED: transcription factor bHLH118-like
TrEMBLA0A067JQS61e-53A0A067JQS6_JATCU; Uncharacterized protein
STRINGPOPTR_0015s14070.13e-48(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25410.12e-22bHLH family protein